Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotransferase | A6122_RS04755 | Not Available | Positive | 1066281 - 1067288 | 36966.4 |
| t3ss effector hopa1 family protein | A6122_RS04760 | Not Available | Positive | 1067285 - 1068211 | 32270.1 |
| llm class flavin-dependent oxidoreductase | A6122_RS04765 | Not Available | Positive | 1068208 - 1069173 | 34199.9 |
| pldc n-terminal domain-containing protein | A6122_RS04770 | Not Available | Positive | 1069170 - 1069367 | 7324.39 |
| abc transporter atp-binding protein | A6122_RS04775 | Not Available | Positive | 1069408 - 1070316 | 31526.2 |
| hypothetical protein | A6122_RS04780 | Not Available | Positive | 1070313 - 1071068 | 26288.2 |
| abc transporter atp-binding protein | A6122_RS04785 | Not Available | Positive | 1071065 - 1072033 | 34242.0 |
| abc transporter permease subunit | A6122_RS04790 | Not Available | Positive | 1072030 - 1072839 | 28868.6 |
| tetr/acrr family transcriptional regulator | A6122_RS04795 | Not Available | Negative | 1072847 - 1073386 | 19093.6 |
| mfs transporter | A6122_RS04800 | Not Available | Positive | 1073462 - 1075006 | 51756.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
