Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | A6122_RS04655 | Not Available | Negative | 1044777 - 1045760 | 35215.6 |
| merr family transcriptional regulator | A6122_RS04660 | Not Available | Negative | 1045761 - 1046159 | 14809.8 |
| glycoside hydrolase family 15 protein | A6122_RS04665 | Not Available | Negative | 1046299 - 1048071 | 65400.4 |
| glucose-6-phosphate dehydrogenase | A6122_RS04670 | Not Available | Positive | 1048153 - 1049526 | 49346.5 |
| hypothetical protein | A6122_RS04675 | Not Available | Negative | 1049580 - 1049993 | 14846.6 |
| hypothetical protein | A6122_RS04680 | Not Available | Negative | 1050105 - 1050314 | 7924.63 |
| slc13 family permease | A6122_RS04685 | Not Available | Positive | 1050466 - 1051623 | 39497.7 |
| trehalose-6-phosphate synthase | A6122_RS04690 | Not Available | Positive | 1051740 - 1053365 | 59798.6 |
| trehalose-phosphatase | A6122_RS04695 | Not Available | Positive | 1053362 - 1054138 | 27614.8 |
| dihydroxy-acid dehydratase | A6122_RS04700 | Not Available | Positive | 1054203 - 1055897 | 59086.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
