Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | A6122_RS04465 | Not Available | Positive | 1009143 - 1010225 | 38597.7 |
| cdp-alcohol phosphatidyltransferase family protein | A6122_RS04470 | Not Available | Positive | 1010222 - 1011022 | 28224.9 |
| glycosyltransferase family 2 protein | A6122_RS04475 | Not Available | Positive | 1011009 - 1011884 | 32120.5 |
| amylosucrase | A6122_RS04480 | Not Available | Positive | 1011927 - 1013849 | 71644.0 |
| hypothetical protein | A6122_RS04485 | Not Available | Positive | 1013905 - 1015194 | 47805.6 |
| ai-2e family transporter | A6122_RS04490 | Not Available | Positive | 1015283 - 1016434 | 40074.5 |
| hhh-gpd-type base excision dna repair protein | A6122_RS04495 | Not Available | Positive | 1016560 - 1017195 | 22783.8 |
| glutamate-cysteine ligase family protein | A6122_RS04500 | Not Available | Positive | 1017361 - 1017492 | 4952.05 |
| alpha/beta fold hydrolase | A6122_RS16405 | Not Available | Negative | 1017572 - 1019071 | 51927.2 |
| abc transporter atp-binding protein | A6122_RS04510 | Not Available | Negative | 1019114 - 1019932 | 30031.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
