Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0182 family protein | A6122_RS04415 | Not Available | Positive | 996746 - 999697 | 105523.0 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | A6122_RS04420 | Not Available | Positive | 999703 - 1000293 | 20741.5 |
| Trna-met | Not Available | Not Available | Positive | 1000366 - 1000439 | Not Available |
| hypothetical protein | A6122_RS04430 | Not Available | Positive | 1000666 - 1001871 | 40372.4 |
| atp-binding cassette domain-containing protein | A6122_RS04435 | Not Available | Positive | 1001868 - 1003790 | 65369.5 |
| voc family protein | A6122_RS04440 | Not Available | Negative | 1003799 - 1004179 | 13074.4 |
| chap domain-containing protein | A6122_RS04445 | Not Available | Positive | 1004342 - 1005316 | 34228.4 |
| carbon-nitrogen hydrolase family protein | A6122_RS04450 | Not Available | Positive | 1005316 - 1006119 | 28688.6 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | A6122_RS04455 | Not Available | Negative | 1006143 - 1007339 | 41396.6 |
| s1c family serine protease | A6122_RS04460 | Not Available | Positive | 1007457 - 1009013 | 50729.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
