Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS04365 | Not Available | Negative | 982181 - 982483 | 10558.3 |
| duf3107 domain-containing protein | A6122_RS04370 | Not Available | Negative | 982504 - 982728 | 8176.85 |
| atp-dependent dna helicase | A6122_RS04375 | Not Available | Positive | 982878 - 986105 | 113967.0 |
| atp-dependent dna helicase | A6122_RS04380 | Not Available | Positive | 986102 - 989314 | 116563.0 |
| phosphotransferase | A6122_RS04385 | Not Available | Negative | 989251 - 990318 | 37248.5 |
| nad(+) diphosphatase | A6122_RS04390 | Not Available | Positive | 990435 - 991379 | 34119.1 |
| atp-dependent helicase | A6122_RS04395 | Not Available | Positive | 991376 - 993076 | 61861.0 |
| hypothetical protein | A6122_RS04400 | Not Available | Negative | 992997 - 993800 | 28366.3 |
| zinc-dependent metalloprotease | A6122_RS04405 | Not Available | Negative | 993869 - 995332 | 51417.4 |
| pdz domain-containing protein | A6122_RS04410 | Not Available | Positive | 995550 - 996644 | 36932.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
