Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonase/enoyl-coa hydratase family protein | A6122_RS04315 | Not Available | Negative | 969646 - 970437 | 27522.9 |
| arginase family protein | A6122_RS04320 | Not Available | Negative | 970523 - 971356 | 27835.9 |
| hypothetical protein | A6122_RS04325 | Not Available | Negative | 971401 - 972177 | 26606.5 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | A6122_RS04330 | Not Available | Positive | 972258 - 973010 | 26365.6 |
| aminopeptidase p family protein | A6122_RS04335 | Not Available | Negative | 973173 - 974678 | 54890.0 |
| endonuclease/exonuclease/phosphatase family protein | A6122_RS04340 | Not Available | Negative | 974769 - 975788 | 34632.9 |
| php domain-containing protein | A6122_RS04345 | Not Available | Positive | 975876 - 976712 | 28987.0 |
| dead/deah box helicase | A6122_RS04350 | Not Available | Negative | 976775 - 978193 | 51695.6 |
| ferritin-like fold-containing protein | A6122_RS04355 | Not Available | Positive | 978348 - 979067 | 26125.3 |
| hypothetical protein | A6122_RS04360 | Not Available | Negative | 979076 - 982024 | 103204.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
