Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS00390 | Not Available | Negative | 84930 - 85121 | 6916.86 |
| recombinase family protein | A6122_RS00395 | Not Available | Positive | 85403 - 86005 | 21748.1 |
| recombinase family protein | A6122_RS00400 | Not Available | Positive | 86209 - 86730 | 18450.7 |
| duf5677 domain-containing protein | A6122_RS00405 | Not Available | Positive | 86732 - 87562 | 30614.5 |
| hypothetical protein | A6122_RS00410 | Not Available | Negative | 87564 - 88427 | 32101.8 |
| hypothetical protein | A6122_RS00415 | Not Available | Negative | 89000 - 89746 | 26379.5 |
| hypothetical protein | A6122_RS00420 | Not Available | Negative | 89751 - 90119 | 12661.8 |
| srpbcc family protein | A6122_RS00425 | Not Available | Positive | 90419 - 90853 | 15488.3 |
| marr family winged helix-turn-helix transcriptional regulator | A6122_RS00430 | Not Available | Positive | 90850 - 91284 | 15755.8 |
| tetr/acrr family transcriptional regulator | A6122_RS00435 | Not Available | Negative | 91277 - 91936 | 23083.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
