Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 1 protein | A6122_RS04265 | Not Available | Positive | 960900 - 962342 | 51984.8 |
| hypothetical protein | A6122_RS04270 | Not Available | Positive | 962368 - 962679 | 10959.2 |
| hypothetical protein | A6122_RS04275 | Not Available | Positive | 962884 - 963291 | 13962.4 |
| amidase | A6122_RS04280 | Not Available | Positive | 963344 - 964768 | 50129.5 |
| sip domain-containing protein | A6122_RS04285 | Not Available | Positive | 964854 - 965294 | 15930.7 |
| siderophore-interacting protein | A6122_RS04290 | Not Available | Positive | 965358 - 966299 | 33563.6 |
| sdr family nad(p)-dependent oxidoreductase | A6122_RS04295 | Not Available | Negative | 966526 - 967386 | 30462.4 |
| fe-s oxidoreductase | A6122_RS04300 | Not Available | Negative | 967376 - 967762 | 14112.0 |
| nad(p)/fad-dependent oxidoreductase | A6122_RS04305 | Not Available | Negative | 967759 - 969222 | 50338.5 |
| ribonuclease e inhibitor rrab | A6122_RS04310 | Not Available | Negative | 969281 - 969649 | 13687.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
