Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopyruvate hydratase | A6122_RS04215 | Not Available | Positive | 952604 - 953884 | 44831.6 |
| hypothetical protein | A6122_RS16945 | Not Available | Negative | 953988 - 954245 | 8226.85 |
| septum formation initiator family protein | A6122_RS16950 | Not Available | Positive | 954235 - 954612 | 13499.9 |
| duf501 domain-containing protein | A6122_RS04230 | Not Available | Positive | 954696 - 955208 | 17934.2 |
| nad(p)/fad-dependent oxidoreductase | A6122_RS04235 | Not Available | Positive | 955361 - 956779 | 50988.3 |
| Trna-leu | Not Available | Not Available | Positive | 956815 - 956888 | Not Available |
| hypothetical protein | A6122_RS04245 | Not Available | Negative | 956921 - 957100 | 6200.33 |
| atp-dependent dna ligase | A6122_RS04250 | Not Available | Positive | 957357 - 957686 | 12085.3 |
| transglutaminase family protein | A6122_RS04255 | Not Available | Positive | 957721 - 958512 | 27807.2 |
| hypothetical protein | A6122_RS04260 | Not Available | Negative | 958543 - 960684 | 70173.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
