Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-cysteine ligase family protein | A6122_RS04165 | Not Available | Negative | 940309 - 941489 | 42676.9 |
| transcription-repair coupling factor | A6122_RS04170 | Not Available | Positive | 941760 - 945371 | 131054.0 |
| hypothetical protein | A6122_RS04175 | Not Available | Positive | 945666 - 945845 | 5605.09 |
| mazg family protein | A6122_RS04180 | Not Available | Positive | 945925 - 946578 | 23601.9 |
| histidine--trna ligase | A6122_RS04185 | Not Available | Positive | 946701 - 947984 | 45793.0 |
| abc transporter substrate-binding protein | A6122_RS04190 | Not Available | Positive | 948218 - 949309 | 37276.0 |
| abc transporter atp-binding protein | A6122_RS04195 | Not Available | Positive | 949425 - 950162 | 26884.5 |
| abc transporter permease | A6122_RS04200 | Not Available | Positive | 950179 - 950997 | 27981.0 |
| abc transporter permease | A6122_RS04205 | Not Available | Positive | 951000 - 951887 | 30802.7 |
| adenine phosphoribosyltransferase | A6122_RS04210 | Not Available | Negative | 951919 - 952446 | 18393.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
