Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-dependent oxidoreductase | A6122_RS04115 | Not Available | Positive | 929245 - 930810 | 53970.0 |
| abc-f family atp-binding cassette domain-containing protein | A6122_RS04120 | Not Available | Positive | 930897 - 932687 | 65790.4 |
| marr family winged helix-turn-helix transcriptional regulator | A6122_RS04125 | Not Available | Negative | 932768 - 933259 | 18392.1 |
| Trna-gln | Not Available | Not Available | Positive | 933374 - 933445 | Not Available |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | A6122_RS04135 | Not Available | Positive | 933488 - 934963 | 50328.8 |
| ribose-phosphate diphosphokinase | A6122_RS04140 | Not Available | Positive | 934960 - 935937 | 35147.5 |
| nadp-dependent phosphogluconate dehydrogenase | A6122_RS04145 | Not Available | Negative | 936016 - 937473 | 51707.8 |
| glutathione s-transferase family protein | A6122_RS04150 | Not Available | Negative | 937639 - 938655 | 38058.7 |
| 50s ribosomal protein l25/general stress protein ctc | A6122_RS04155 | Not Available | Positive | 938930 - 939538 | 21457.5 |
| aminoacyl-trna hydrolase | A6122_RS04160 | Not Available | Positive | 939632 - 940216 | 20628.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
