Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | A6122_RS04075 | Not Available | Negative | 917784 - 919148 | 48407.0 |
| yeih family protein | A6122_RS04080 | Not Available | Negative | 919217 - 920218 | 33382.3 |
| dolichyl-phosphate-mannose--protein mannosyltransferase | A6122_RS04085 | Not Available | Negative | 920197 - 921867 | 61125.6 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | A6122_RS04090 | Not Available | Positive | 921954 - 922775 | 29224.2 |
| methionine--trna ligase | A6122_RS04095 | Not Available | Positive | 922869 - 924446 | 58776.1 |
| transposase family protein | A6122_RS15665 | Not Available | Negative | 924589 - 925359 | 28588.6 |
| hypothetical protein | A6122_RS16400 | Not Available | Positive | 925735 - 926043 | 11555.9 |
| tatd family hydrolase | A6122_RS04100 | Not Available | Positive | 926081 - 927004 | 33519.3 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | A6122_RS04105 | Not Available | Positive | 927001 - 927999 | 34463.3 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | A6122_RS04110 | Not Available | Positive | 928009 - 928944 | 32222.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
