Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is256 family transposase | A6122_RS04025 | Not Available | Positive | 903907 - 905268 | 50192.2 |
| glutamate-cysteine ligase family protein | A6122_RS04030 | Not Available | Negative | 905313 - 905744 | 15756.1 |
| atp-dependent rna helicase hrpa | A6122_RS04035 | Not Available | Negative | 905986 - 909900 | 145674.0 |
| pldc n-terminal domain-containing protein | A6122_RS16925 | Not Available | Positive | 910022 - 910273 | 8668.8 |
| thioredoxin domain-containing protein | A6122_RS04045 | Not Available | Positive | 910351 - 912195 | 64818.6 |
| sulfurtransferase | A6122_RS04050 | Not Available | Negative | 912182 - 913069 | 31326.1 |
| l-serine ammonia-lyase | A6122_RS04055 | Not Available | Negative | 913170 - 914549 | 47766.0 |
| peptidoglycan-binding protein | A6122_RS04060 | Not Available | Negative | 914632 - 915660 | 33678.7 |
| peptidoglycan-binding protein | A6122_RS17105 | Not Available | Negative | 915666 - 916697 | 34449.0 |
| coa-binding protein | A6122_RS04070 | Not Available | Negative | 917212 - 917781 | 20678.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
