Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-ribosomal peptide synthetase | A6122_RS03975 | Not Available | Positive | 885506 - 894721 | 330035.0 |
| phosphopantetheine-binding protein | A6122_RS03980 | Not Available | Positive | 894718 - 894981 | 9415.33 |
| beta-ketoacyl synthase n-terminal-like domain-containing protein | A6122_RS03985 | Not Available | Positive | 894974 - 896260 | 43902.5 |
| hydroxymethylglutaryl-coa synthase family protein | A6122_RS03990 | Not Available | Positive | 896257 - 897513 | 44863.0 |
| enoyl-coa hydratase/isomerase | A6122_RS03995 | Not Available | Positive | 897504 - 899696 | 77788.7 |
| acp s-malonyltransferase | A6122_RS04000 | Not Available | Positive | 899693 - 901609 | 67714.1 |
| hypothetical protein | A6122_RS04005 | Not Available | Positive | 901847 - 902026 | 6111.27 |
| lysr family transcriptional regulator | A6122_RS04010 | Not Available | Negative | 902087 - 902335 | 8887.86 |
| is3 family transposase | A6122_RS04015 | Not Available | Negative | 902751 - 903464 | 27558.9 |
| hypothetical protein | A6122_RS04020 | Not Available | Positive | 903695 - 903898 | 7233.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
