Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS03925 | Not Available | Negative | 828421 - 828912 | 17481.4 |
| pentapeptide repeat-containing protein | A6122_RS03930 | Not Available | Positive | 829319 - 830029 | 25688.3 |
| amidase | A6122_RS03935 | Not Available | Negative | 830040 - 831545 | 52341.0 |
| metallophosphoesterase | A6122_RS03940 | Not Available | Positive | 831597 - 832439 | 31654.3 |
| 4'-phosphopantetheinyl transferase | A6122_RS03945 | Not Available | Positive | 832436 - 833110 | 23932.7 |
| thioesterase ii family protein | A6122_RS03950 | Not Available | Negative | 833097 - 833864 | 27984.3 |
| sdr family nad(p)-dependent oxidoreductase | A6122_RS03955 | Not Available | Positive | 834114 - 845261 | 389520.0 |
| non-ribosomal peptide synthetase | A6122_RS16390 | Not Available | Positive | 845258 - 864550 | 674477.0 |
| sdr family nad(p)-dependent oxidoreductase | A6122_RS16395 | Not Available | Positive | 864664 - 877839 | 458397.0 |
| non-ribosomal peptide synthetase | A6122_RS03970 | Not Available | Positive | 877836 - 885509 | 273757.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
