Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS03885 | Not Available | Negative | 819985 - 820527 | 19293.0 |
| transposase family protein | A6122_RS03890 | Not Available | Positive | 821146 - 821838 | 24956.7 |
| transposase family protein | A6122_RS03895 | Not Available | Positive | 821963 - 822718 | 28363.7 |
| hypothetical protein | A6122_RS03900 | Not Available | Negative | 823160 - 823978 | 29488.0 |
| hypothetical protein | A6122_RS16920 | Not Available | Positive | 824298 - 824444 | 5339.25 |
| hypothetical protein | A6122_RS03905 | Not Available | Negative | 824633 - 825151 | 19045.6 |
| helix-turn-helix domain-containing protein | A6122_RS03910 | Not Available | Negative | 825244 - 825819 | 20888.8 |
| glutamate-cysteine ligase family protein | A6122_RS17545 | Not Available | Positive | 826231 - 826443 | 7265.66 |
| duf7007 domain-containing protein | A6122_RS03915 | Not Available | Negative | 826447 - 827580 | 41741.9 |
| hypothetical protein | A6122_RS03920 | Not Available | Negative | 827707 - 827955 | 8885.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
