Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS03835 | Not Available | Negative | 810908 - 811159 | 8966.61 |
| cold-shock protein | A6122_RS03840 | Not Available | Positive | 811226 - 811606 | 13420.1 |
| duf3027 domain-containing protein | A6122_RS03845 | Not Available | Positive | 811599 - 812351 | 27206.2 |
| duf2530 domain-containing protein | A6122_RS03850 | Not Available | Negative | 812828 - 813055 | 7989.88 |
| phosphoserine transaminase | A6122_RS03855 | Not Available | Negative | 813064 - 814182 | 40135.4 |
| metal-dependent transcriptional regulator | A6122_RS03860 | Not Available | Positive | 814309 - 815001 | 25716.8 |
| c40 family peptidase | A6122_RS03865 | Not Available | Positive | 815269 - 816231 | 33046.6 |
| hypothetical protein | A6122_RS03870 | Not Available | Positive | 816413 - 816649 | 8121.85 |
| hnh endonuclease | A6122_RS03875 | Not Available | Positive | 816649 - 817146 | 18483.4 |
| phosphoketolase | A6122_RS03880 | Not Available | Negative | 817442 - 819916 | 91774.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
