Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | A6122_RS15335 | Not Available | Negative | 73246 - 73536 | 10981.0 |
| 4'-phosphopantetheinyl transferase superfamily protein | A6122_RS16875 | Not Available | Positive | 73816 - 74268 | 16723.1 |
| mfs transporter | A6122_RS00345 | Not Available | Positive | 74265 - 75812 | 52128.6 |
| fad-dependent monooxygenase | A6122_RS00350 | Not Available | Positive | 75809 - 77377 | 57987.2 |
| ppox class f420-dependent oxidoreductase | A6122_RS00355 | Not Available | Positive | 77374 - 77766 | 14756.5 |
| marr family winged helix-turn-helix transcriptional regulator | A6122_RS00360 | Not Available | Positive | 77839 - 78306 | 17195.6 |
| aldo/keto reductase | A6122_RS00365 | Not Available | Positive | 78397 - 79419 | 36315.8 |
| hypothetical protein | A6122_RS00375 | Not Available | Negative | 80692 - 81177 | 17557.5 |
| transposase family protein | A6122_RS00380 | Not Available | Positive | 82406 - 82648 | 9265.18 |
| transposase family protein | A6122_RS15345 | Not Available | Positive | 82688 - 83161 | 18001.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
