Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin domain-containing protein | A6122_RS03785 | Not Available | Positive | 802702 - 803751 | 36054.6 |
| Trna-thr | Not Available | Not Available | Positive | 803869 - 803941 | Not Available |
| nitroreductase family protein | A6122_RS03795 | Not Available | Negative | 804027 - 804578 | 20015.1 |
| peptide-methionine (r)-s-oxide reductase msrb | A6122_RS03800 | Not Available | Negative | 804581 - 804988 | 14974.2 |
| duf3263 domain-containing protein | A6122_RS03805 | Not Available | Positive | 805181 - 805462 | 10307.3 |
| lytr c-terminal domain-containing protein | A6122_RS03810 | Not Available | Positive | 805507 - 806049 | 18173.3 |
| cold-shock protein | A6122_RS03815 | Not Available | Positive | 806218 - 806421 | 7143.34 |
| chaperonin groel | A6122_RS03820 | Not Available | Positive | 806601 - 808223 | 56614.9 |
| hamp domain-containing sensor histidine kinase | A6122_RS03825 | Not Available | Negative | 808407 - 810059 | 59279.1 |
| response regulator transcription factor | A6122_RS03830 | Not Available | Negative | 810130 - 810819 | 25574.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
