Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate signaling complex protein phou | A6122_RS03735 | Not Available | Negative | 791940 - 792581 | 23968.5 |
| cell wall metabolism sensor histidine kinase walk | A6122_RS03740 | Not Available | Positive | 792798 - 793967 | 41466.0 |
| response regulator transcription factor | A6122_RS03745 | Not Available | Positive | 793964 - 794641 | 25321.6 |
| dna modification methylase | A6122_RS03750 | Not Available | Negative | 794953 - 795576 | 21076.7 |
| card family transcriptional regulator | A6122_RS03755 | Not Available | Positive | 795680 - 796162 | 17572.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | A6122_RS03760 | Not Available | Positive | 796156 - 797373 | 41282.3 |
| cysteine--trna ligase | A6122_RS03765 | Not Available | Positive | 797431 - 798879 | 53202.2 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | A6122_RS03770 | Not Available | Positive | 798869 - 799888 | 35315.7 |
| duf4032 domain-containing protein | A6122_RS03775 | Not Available | Negative | 799972 - 801288 | 49050.9 |
| abc transporter atp-binding protein | A6122_RS03780 | Not Available | Negative | 801389 - 802465 | 38946.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
