Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | A6122_RS03685 | Not Available | Negative | 782007 - 782942 | 33708.8 |
| rna degradosome polyphosphate kinase | A6122_RS03690 | Not Available | Negative | 782947 - 785151 | 82659.8 |
| mycothiol synthase | A6122_RS03695 | Not Available | Negative | 785260 - 786141 | 31347.2 |
| winged helix-turn-helix domain-containing protein | A6122_RS03700 | Not Available | Negative | 786113 - 786802 | 25037.1 |
| hypothetical protein | A6122_RS03705 | Not Available | Positive | 786879 - 787139 | 8756.09 |
| fabp family protein | A6122_RS03710 | Not Available | Positive | 787336 - 787944 | 21662.5 |
| folate-binding protein ygfz | A6122_RS03715 | Not Available | Positive | 787979 - 789070 | 38497.8 |
| aromatic acid exporter family protein | A6122_RS03720 | Not Available | Positive | 789079 - 790209 | 38807.1 |
| class i sam-dependent methyltransferase | A6122_RS03725 | Not Available | Negative | 790213 - 791022 | 29516.7 |
| phosphoglyceromutase | A6122_RS03730 | Not Available | Positive | 791071 - 791823 | 27761.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
