Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS03635 | Not Available | Positive | 774237 - 774425 | 7438.87 |
| Trna-lys | Not Available | Not Available | Positive | 774659 - 774734 | Not Available |
| dna-directed rna polymerase subunit beta | A6122_RS03645 | Not Available | Positive | 774870 - 775499 | 22619.7 |
| hypothetical protein | A6122_RS03650 | Not Available | Positive | 775768 - 776205 | 15056.7 |
| ecf rna polymerase sigma factor sigk | A6122_RS03655 | Not Available | Positive | 776202 - 776762 | 20676.8 |
| anti-sigma factor domain-containing protein | A6122_RS03660 | Not Available | Positive | 776759 - 777613 | 29060.8 |
| phosphate abc transporter atp-binding protein pstb | A6122_RS03665 | Not Available | Negative | 777718 - 778497 | 28356.9 |
| phosphate abc transporter permease psta | A6122_RS03670 | Not Available | Negative | 778539 - 779615 | 38061.9 |
| phosphate abc transporter permease subunit pstc | A6122_RS03675 | Not Available | Negative | 779615 - 780556 | 32640.9 |
| phosphate abc transporter substrate-binding protein psts | A6122_RS03680 | Not Available | Negative | 780704 - 781810 | 36879.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
