Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | A6122_RS16915 | Not Available | Positive | 740335 - 741168 | 31744.0 |
| transposase family protein | A6122_RS03495 | Not Available | Negative | 741078 - 741833 | 28640.2 |
| hypothetical protein | A6122_RS16375 | Not Available | Positive | 742056 - 742196 | 5298.36 |
| type vii secretion protein esaa | A6122_RS03500 | Not Available | Negative | 742203 - 742838 | 23027.1 |
| phosphoribosylglycinamide formyltransferase | A6122_RS03505 | Not Available | Positive | 743300 - 743893 | 20981.1 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | A6122_RS03510 | Not Available | Positive | 743890 - 745491 | 55622.0 |
| dimethylargininase | A6122_RS17515 | Not Available | Positive | 745657 - 746931 | 44487.5 |
| abc transporter atp-binding protein | A6122_RS03520 | Not Available | Positive | 747095 - 748975 | 68046.3 |
| abc transporter atp-binding protein | A6122_RS03525 | Not Available | Positive | 748972 - 750774 | 64729.8 |
| mgmt family protein | A6122_RS03530 | Not Available | Negative | 751041 - 751463 | 15240.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
