Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pycsar system effector family protein | A6122_RS03470 | Not Available | Positive | 732849 - 733334 | 16932.5 |
| transposase family protein | A6122_RS15510 | Not Available | Negative | 733920 - 734372 | 17150.4 |
| glutamate-cysteine ligase family protein | A6122_RS17225 | Not Available | Positive | 734486 - 734821 | 12114.6 |
| is256 family transposase | A6122_RS03475 | Not Available | Negative | 734864 - 736225 | 50192.2 |
| glutamate-cysteine ligase family protein | A6122_RS03480 | Not Available | Positive | 736263 - 737175 | 32159.1 |
| hypothetical protein | A6122_RS16365 | Not Available | Negative | 737160 - 737372 | 7575.34 |
| isl3 family transposase | A6122_RS03485 | Not Available | Negative | 737380 - 738690 | 48672.6 |
| hypothetical protein | A6122_RS03490 | Not Available | Negative | 738728 - 739000 | 10113.5 |
| transposase family protein | A6122_RS15515 | Not Available | Positive | 739215 - 739955 | 26916.3 |
| transposase | A6122_RS15520 | Not Available | Positive | 739988 - 740278 | 10981.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
