Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS03375 | Not Available | Negative | 710561 - 711550 | 35919.4 |
| cation:proton antiporter regulatory subunit | A6122_RS03380 | Not Available | Positive | 711771 - 712289 | 17915.2 |
| cation:proton antiporter | A6122_RS03385 | Not Available | Positive | 712292 - 713707 | 50488.0 |
| surf1 family cytochrome oxidase biogenesis protein | A6122_RS03390 | Not Available | Positive | 713789 - 714592 | 28707.7 |
| duf3817 domain-containing protein | A6122_RS03395 | Not Available | Positive | 714603 - 715085 | 17965.0 |
| glutamine-hydrolyzing gmp synthase | A6122_RS03400 | Not Available | Positive | 715081 - 716679 | 56726.1 |
| hypothetical protein | A6122_RS03405 | Not Available | Negative | 716937 - 717299 | 13845.3 |
| duf418 domain-containing protein | A6122_RS03410 | Not Available | Negative | 717309 - 718337 | 35584.4 |
| bax inhibitor-1/ycca family protein | A6122_RS03415 | Not Available | Negative | 718461 - 719243 | 27950.9 |
| glycerophosphodiester phosphodiesterase family protein | A6122_RS03420 | Not Available | Positive | 719449 - 720489 | 37932.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
