Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | A6122_RS00290 | Not Available | Positive | 59738 - 60688 | 33718.6 |
| carbohydrate binding domain-containing protein | A6122_RS00295 | Not Available | Positive | 60986 - 66253 | 180232.0 |
| hypothetical protein | A6122_RS00300 | Not Available | Positive | 67177 - 67428 | 9235.87 |
| zeta toxin family protein | A6122_RS00305 | Not Available | Positive | 67425 - 68459 | 37807.6 |
| hypothetical protein | A6122_RS00315 | Not Available | Positive | 69478 - 69687 | 7791.29 |
| zinc-binding dehydrogenase | A6122_RS00320 | Not Available | Negative | 69755 - 70726 | 32128.7 |
| 3-hydroxyacyl-coa dehydrogenase family protein | A6122_RS00325 | Not Available | Positive | 71021 - 71404 | 13685.6 |
| is3 family transposase | A6122_RS17520 | Not Available | Negative | 71441 - 71653 | 8087.5 |
| transposase family protein | A6122_RS00330 | Not Available | Negative | 71592 - 72347 | 28640.2 |
| is3 family transposase | A6122_RS17175 | Not Available | Negative | 72494 - 73276 | 29702.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
