Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | A6122_RS03270 | Not Available | Negative | 687829 - 688425 | 22239.9 |
| 3-isopropylmalate dehydratase large subunit | A6122_RS03275 | Not Available | Negative | 688422 - 689837 | 50567.2 |
| fad/nad(p)-binding protein | A6122_RS03280 | Not Available | Negative | 689818 - 691785 | 70117.6 |
| cysteine hydrolase family protein | A6122_RS03285 | Not Available | Positive | 692005 - 692577 | 20671.6 |
| pyridoxal phosphate-dependent aminotransferase | A6122_RS03290 | Not Available | Positive | 692574 - 693812 | 44832.6 |
| leua family protein | A6122_RS03295 | Not Available | Positive | 693824 - 694999 | 42100.9 |
| taud/tfda family dioxygenase | A6122_RS03300 | Not Available | Positive | 694996 - 696018 | 38317.1 |
| mfs transporter | A6122_RS03310 | Not Available | Positive | 696586 - 697767 | 41063.1 |
| hypothetical protein | A6122_RS03315 | Not Available | Negative | 697957 - 698160 | 7339.68 |
| abc transporter atp-binding protein | A6122_RS03320 | Not Available | Negative | 698510 - 699286 | 28152.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
