Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18-alanine n-acetyltransferase | A6122_RS03220 | Not Available | Positive | 679129 - 679602 | 17292.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | A6122_RS03225 | Not Available | Positive | 679599 - 680663 | 36197.6 |
| duf4190 domain-containing protein | A6122_RS03230 | Not Available | Positive | 680779 - 681036 | 8885.16 |
| duf4190 domain-containing protein | A6122_RS17100 | Not Available | Positive | 681078 - 681446 | 12093.8 |
| duf4190 domain-containing protein | A6122_RS03240 | Not Available | Positive | 681497 - 681985 | 16440.0 |
| class i sam-dependent methyltransferase | A6122_RS03245 | Not Available | Negative | 681979 - 683184 | 42760.0 |
| co-chaperone groes | A6122_RS03250 | Not Available | Positive | 683344 - 683640 | 10401.5 |
| eama family transporter rard | A6122_RS03255 | Not Available | Positive | 683878 - 684771 | 31993.3 |
| abc transporter substrate-binding protein | A6122_RS03260 | Not Available | Positive | 684941 - 686227 | 43487.8 |
| lysr family transcriptional regulator | A6122_RS03265 | Not Available | Positive | 686926 - 687816 | 31925.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
