Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS03170 | Not Available | Positive | 670269 - 670856 | 19678.2 |
| 50s ribosomal protein l13 | A6122_RS03175 | Not Available | Positive | 671062 - 671508 | 16249.7 |
| 30s ribosomal protein s9 | A6122_RS03180 | Not Available | Positive | 671562 - 672047 | 17305.8 |
| phosphoglucosamine mutase | A6122_RS03185 | Not Available | Positive | 672101 - 673456 | 46385.3 |
| type i pantothenate kinase | A6122_RS03190 | Not Available | Negative | 673604 - 674560 | 35675.7 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | A6122_RS03195 | Not Available | Positive | 674639 - 676486 | 65682.5 |
| holo-acp synthase | A6122_RS03200 | Not Available | Positive | 676494 - 676844 | 12456.0 |
| alanine racemase | A6122_RS03205 | Not Available | Positive | 676858 - 677997 | 40150.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | A6122_RS03210 | Not Available | Positive | 678047 - 678490 | 15518.3 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | A6122_RS03215 | Not Available | Positive | 678512 - 679132 | 21182.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
