Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannitol-1-phosphate 5-dehydrogenase | A6122_RS03120 | Not Available | Positive | 663130 - 664269 | 40821.3 |
| signal peptidase i | A6122_RS03125 | Not Available | Negative | 664415 - 665128 | 25626.3 |
| translation initiation factor if-1 | A6122_RS03130 | Not Available | Positive | 665439 - 665660 | 8406.41 |
| 50s ribosomal protein l36 | A6122_RS03135 | Not Available | Positive | 665759 - 665875 | 4427.56 |
| 30s ribosomal protein s13 | A6122_RS03140 | Not Available | Positive | 666063 - 666443 | 14204.2 |
| 30s ribosomal protein s11 | A6122_RS03145 | Not Available | Positive | 666477 - 666875 | 13917.7 |
| dna-directed rna polymerase subunit alpha | A6122_RS03150 | Not Available | Positive | 667022 - 668008 | 35853.5 |
| 50s ribosomal protein l17 | A6122_RS03155 | Not Available | Positive | 668080 - 668622 | 19283.2 |
| hypothetical protein | A6122_RS03160 | Not Available | Positive | 668798 - 669346 | 17460.6 |
| trna pseudouridine(38-40) synthase trua | A6122_RS03165 | Not Available | Positive | 669379 - 670272 | 32693.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
