Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l15 | A6122_RS03070 | Not Available | Positive | 652615 - 653139 | 18089.8 |
| preprotein translocase subunit secy | A6122_RS03075 | Not Available | Positive | 653246 - 654568 | 47942.4 |
| adenylate kinase | A6122_RS03080 | Not Available | Positive | 654565 - 655182 | 22206.3 |
| type i methionyl aminopeptidase | A6122_RS03085 | Not Available | Positive | 655186 - 656031 | 29686.1 |
| transcription antiterminator | A6122_RS03090 | Not Available | Negative | 656093 - 658012 | 71439.9 |
| pts sugar transporter subunit iib | A6122_RS16910 | Not Available | Positive | 658260 - 658646 | 13374.0 |
| hpr family phosphocarrier protein | A6122_RS03100 | Not Available | Positive | 658682 - 658948 | 9098.72 |
| phosphoenolpyruvate--protein phosphotransferase | A6122_RS03105 | Not Available | Positive | 659229 - 660920 | 58067.0 |
| pts mannitol transporter subunit iicb | A6122_RS03110 | Not Available | Positive | 661026 - 662588 | 53599.6 |
| pts sugar transporter subunit iia | A6122_RS03115 | Not Available | Positive | 662696 - 663130 | 15435.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
