Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l29 | A6122_RS03020 | Not Available | Positive | 648153 - 648479 | 12035.5 |
| 30s ribosomal protein s17 | A6122_RS03025 | Not Available | Positive | 648479 - 648793 | 11645.9 |
| 50s ribosomal protein l14 | A6122_RS03030 | Not Available | Positive | 648827 - 649195 | 13230.3 |
| 50s ribosomal protein l24 | A6122_RS03035 | Not Available | Positive | 649198 - 649557 | 12797.5 |
| 50s ribosomal protein l5 | A6122_RS03040 | Not Available | Positive | 649557 - 650141 | 21338.5 |
| 30s ribosomal protein s8 | A6122_RS03045 | Not Available | Positive | 650417 - 650815 | 14132.1 |
| 50s ribosomal protein l6 | A6122_RS03050 | Not Available | Positive | 650822 - 651358 | 18677.6 |
| 50s ribosomal protein l18 | A6122_RS03055 | Not Available | Positive | 651361 - 651732 | 13150.8 |
| 30s ribosomal protein s5 | A6122_RS03060 | Not Available | Positive | 651768 - 652433 | 23018.5 |
| 50s ribosomal protein l30 | A6122_RS03065 | Not Available | Positive | 652433 - 652615 | 6884.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
