Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | A6122_RS02920 | Not Available | Positive | 633178 - 633831 | 23619.7 |
| amino acid abc transporter atp-binding protein | A6122_RS02925 | Not Available | Positive | 633818 - 634603 | 28372.4 |
| hypothetical protein | A6122_RS02930 | Not Available | Positive | 634673 - 635380 | 24194.1 |
| duf6121 family protein | A6122_RS02935 | Not Available | Positive | 635377 - 635880 | 17306.4 |
| 30s ribosomal protein s12 | A6122_RS02940 | Not Available | Positive | 636230 - 636604 | 13790.0 |
| 30s ribosomal protein s7 | A6122_RS02945 | Not Available | Positive | 636604 - 637074 | 17256.0 |
| elongation factor g | A6122_RS02950 | Not Available | Positive | 637254 - 639368 | 77577.6 |
| elongation factor tu | A6122_RS02955 | Not Available | Positive | 639593 - 640786 | 43232.6 |
| fructosamine kinase family protein | A6122_RS02960 | Not Available | Positive | 640880 - 641656 | 27279.3 |
| rv0909 family putative ta system antitoxin | A6122_RS02965 | Not Available | Positive | 641742 - 641951 | 7745.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
