Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm domain-containing protein | A6122_RS00245 | Not Available | Positive | 51083 - 51556 | 15752.7 |
| hypothetical protein | A6122_RS16230 | Not Available | Negative | 51656 - 51823 | 5682.34 |
| had hydrolase-like protein | A6122_RS00250 | Not Available | Negative | 51842 - 52537 | 24318.0 |
| sseb family protein | A6122_RS00255 | Not Available | Negative | 52598 - 53035 | 15279.3 |
| lsr2 family protein | A6122_RS00260 | Not Available | Positive | 53381 - 53722 | 11934.8 |
| endonuclease nucs | A6122_RS00265 | Not Available | Negative | 53811 - 54506 | 25329.5 |
| alpha/beta fold hydrolase | A6122_RS00270 | Not Available | Negative | 54607 - 55308 | 24100.5 |
| mfs transporter | A6122_RS00275 | Not Available | Negative | 55894 - 57102 | 40332.4 |
| laci family dna-binding transcriptional regulator | A6122_RS00280 | Not Available | Positive | 57245 - 58294 | 36119.4 |
| mate family efflux transporter | A6122_RS00285 | Not Available | Negative | 58367 - 59668 | 43776.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
