Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS02770 | Not Available | Positive | 597369 - 597716 | 12845.0 |
| hypothetical protein | A6122_RS02775 | Not Available | Positive | 597713 - 598054 | 12103.9 |
| hypothetical protein | A6122_RS02780 | Not Available | Positive | 598051 - 598320 | 10491.7 |
| hypothetical protein | A6122_RS02785 | Not Available | Negative | 598656 - 599462 | 26555.6 |
| lcp family protein | A6122_RS02790 | Not Available | Positive | 599842 - 601056 | 40540.9 |
| lcp family protein | A6122_RS02795 | Not Available | Positive | 601148 - 602374 | 41217.8 |
| Trna-ser | Not Available | Not Available | Positive | 602489 - 602579 | Not Available |
| hypothetical protein | A6122_RS02805 | Not Available | Positive | 602687 - 603196 | 17512.8 |
| dna-formamidopyrimidine glycosylase family protein | A6122_RS02810 | Not Available | Negative | 603201 - 603992 | 29449.4 |
| atp-dependent helicase | A6122_RS02815 | Not Available | Negative | 604011 - 608690 | 166585.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
