Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease domain-containing protein | A6122_RS02720 | Not Available | Positive | 587978 - 588841 | 31300.4 |
| phosphoglucomutase (alpha-d-glucose-1,6-bisphosphate-dependent) | A6122_RS02725 | Not Available | Negative | 588843 - 590465 | 57634.3 |
| prephenate dehydratase | A6122_RS02730 | Not Available | Positive | 590526 - 591497 | 35193.8 |
| hypothetical protein | A6122_RS02735 | Not Available | Positive | 591510 - 592217 | 24496.2 |
| vit1/ccc1 transporter family protein | A6122_RS02740 | Not Available | Negative | 592178 - 593275 | 37877.5 |
| enoyl-coa hydratase/isomerase family protein | A6122_RS02745 | Not Available | Negative | 593564 - 594373 | 28485.5 |
| serine--trna ligase | A6122_RS02750 | Not Available | Positive | 594543 - 595808 | 46353.9 |
| had family hydrolase | A6122_RS02755 | Not Available | Positive | 595805 - 596617 | 28428.8 |
| Trna-ser | Not Available | Not Available | Positive | 596790 - 596877 | Not Available |
| hypothetical protein | A6122_RS16905 | Not Available | Negative | 596904 - 597092 | 6522.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
