Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin/lipoate a/b protein ligase family protein | A6122_RS02620 | Not Available | Positive | 569152 - 570201 | 38016.3 |
| gnat family n-acetyltransferase | A6122_RS02625 | Not Available | Negative | 570260 - 570544 | 10571.2 |
| site-specific dna-methyltransferase | A6122_RS02630 | Not Available | Positive | 570641 - 571513 | 32725.7 |
| hypothetical protein | A6122_RS02635 | Not Available | Positive | 571703 - 572605 | 32945.8 |
| laci family dna-binding transcriptional regulator | A6122_RS02640 | Not Available | Negative | 572695 - 573672 | 34457.2 |
| gh1 family beta-glucosidase | A6122_RS02645 | Not Available | Negative | 573727 - 575202 | 54013.8 |
| mdr family mfs transporter | A6122_RS02650 | Not Available | Negative | 575404 - 577182 | 62694.4 |
| mur ligase family protein | A6122_RS02655 | Not Available | Negative | 577385 - 578929 | 53994.0 |
| d-alanyl-d-alanine carboxypeptidase family protein | A6122_RS02660 | Not Available | Positive | 579147 - 580007 | 29598.4 |
| amidase domain-containing protein | A6122_RS02665 | Not Available | Positive | 580191 - 581615 | 48201.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
