Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | A6122_RS02530 | Not Available | Negative | 548215 - 549075 | 28422.5 |
| histidine phosphatase family protein | A6122_RS02535 | Not Available | Negative | 549081 - 549707 | 22568.7 |
| endonuclease/exonuclease/phosphatase family protein | A6122_RS02540 | Not Available | Negative | 549742 - 550440 | 26268.1 |
| hypothetical protein | A6122_RS02545 | Not Available | Negative | 550563 - 550814 | 8331.89 |
| acyl-coa desaturase | A6122_RS02550 | Not Available | Negative | 550923 - 552038 | 41103.0 |
| pspa/im30 family protein | A6122_RS02555 | Not Available | Negative | 552300 - 553037 | 27286.8 |
| tpm domain-containing protein | A6122_RS02560 | Not Available | Negative | 553098 - 555149 | 70123.3 |
| alkene reductase | A6122_RS02565 | Not Available | Positive | 555377 - 556450 | 37637.0 |
| aspartate aminotransferase family protein | A6122_RS02570 | Not Available | Positive | 556961 - 558241 | 46318.5 |
| hypothetical protein | A6122_RS16345 | Not Available | Positive | 558228 - 559451 | 44878.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
