Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | A6122_RS02485 | Not Available | Negative | 539777 - 540871 | 40499.8 |
| hipa domain-containing protein | A6122_RS02490 | Not Available | Negative | 540982 - 542295 | 48045.5 |
| helix-turn-helix domain-containing protein | A6122_RS16335 | Not Available | Negative | 542279 - 542488 | 7607.07 |
| circularly permuted type 2 atp-grasp protein | A6122_RS02500 | Not Available | Positive | 542729 - 544396 | 60086.0 |
| alpha-e domain-containing protein | A6122_RS02505 | Not Available | Positive | 544396 - 545328 | 35003.8 |
| transglutaminase family protein | A6122_RS02510 | Not Available | Positive | 545325 - 546173 | 31043.4 |
| type ii toxin-antitoxin system rele/pare family toxin | A6122_RS02515 | Not Available | Negative | 546186 - 546446 | 9690.99 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | A6122_RS02520 | Not Available | Negative | 546443 - 546691 | 9197.65 |
| mfs transporter | A6122_RS02525 | Not Available | Negative | 546740 - 548017 | 44776.3 |
| hypothetical protein | A6122_RS16340 | Not Available | Negative | 548014 - 548187 | 6328.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
