Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | A6122_RS02435 | Not Available | Positive | 529721 - 531046 | 47022.9 |
| trypsin-like serine protease | A6122_RS02440 | Not Available | Negative | 531090 - 531614 | 18481.9 |
| zip family metal transporter | A6122_RS02445 | Not Available | Negative | 532058 - 532801 | 24027.4 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | A6122_RS02450 | Not Available | Negative | 532875 - 533972 | 38770.0 |
| glycosyltransferase family 2 protein | A6122_RS02455 | Not Available | Negative | 533969 - 534835 | 31549.2 |
| duf817 family protein | A6122_RS17540 | Not Available | Negative | 534881 - 535387 | 18130.0 |
| vwa domain-containing protein | A6122_RS02465 | Not Available | Positive | 535399 - 536673 | 44652.9 |
| fha domain-containing protein | A6122_RS02470 | Not Available | Positive | 536670 - 537632 | 32837.0 |
| serine/threonine-protein kinase | A6122_RS02475 | Not Available | Negative | 537973 - 538938 | 34072.6 |
| fmn reductase | A6122_RS02480 | Not Available | Negative | 539141 - 539764 | 21707.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
