Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | A6122_RS02385 | Not Available | Positive | 515997 - 517526 | 52005.5 |
| hypothetical protein | A6122_RS02390 | Not Available | Positive | 517523 - 518848 | 45985.6 |
| glutamate abc transporter substrate-binding protein | A6122_RS02395 | Not Available | Positive | 518845 - 519813 | 32950.7 |
| hypothetical protein | A6122_RS02400 | Not Available | Positive | 519810 - 520952 | 41529.4 |
| serine/threonine-protein kinase | A6122_RS02405 | Not Available | Positive | 520949 - 523285 | 82640.7 |
| pp2c family serine/threonine-protein phosphatase | A6122_RS02410 | Not Available | Positive | 523282 - 524304 | 34962.5 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | A6122_RS02415 | Not Available | Positive | 524409 - 525926 | 53526.6 |
| pucr family transcriptional regulator | A6122_RS02420 | Not Available | Negative | 525923 - 527419 | 53361.1 |
| gdsl-type esterase/lipase family protein | A6122_RS02425 | Not Available | Negative | 527597 - 528490 | 30030.0 |
| hypothetical protein | A6122_RS02430 | Not Available | Negative | 528654 - 529490 | 29652.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
