Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase subunit kdpb | A6122_RS00195 | Not Available | Positive | 40114 - 42267 | 73673.7 |
| potassium-transporting atpase subunit kdpc | A6122_RS00200 | Not Available | Positive | 42426 - 43004 | 19524.1 |
| atp-binding protein | A6122_RS00205 | Not Available | Positive | 43135 - 45660 | 88838.6 |
| response regulator | A6122_RS00210 | Not Available | Positive | 45657 - 46334 | 24546.7 |
| s-ribosylhomocysteine lyase | A6122_RS00215 | Not Available | Positive | 46480 - 46932 | 16631.4 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | A6122_RS00220 | Not Available | Positive | 46929 - 47615 | 23396.8 |
| antitoxin | A6122_RS00225 | Not Available | Negative | 47661 - 47846 | 6038.7 |
| abc-f family atp-binding cassette domain-containing protein | A6122_RS00230 | Not Available | Negative | 48335 - 49987 | 58685.6 |
| marr family winged helix-turn-helix transcriptional regulator | A6122_RS00235 | Not Available | Positive | 50073 - 50630 | 20801.7 |
| hypothetical protein | A6122_RS00240 | Not Available | Positive | 50692 - 50994 | 11270.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
