Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS02335 | Not Available | Positive | 506736 - 507356 | 20846.6 |
| ycni family protein | A6122_RS02340 | Not Available | Positive | 507468 - 508238 | 25417.3 |
| copper resistance copc family protein | A6122_RS15470 | Not Available | Positive | 508235 - 508837 | 20115.7 |
| had family hydrolase | A6122_RS02350 | Not Available | Negative | 508868 - 509572 | 24501.0 |
| hnh endonuclease signature motif containing protein | A6122_RS02355 | Not Available | Negative | 509703 - 510986 | 46661.6 |
| type i restriction endonuclease | A6122_RS02360 | Not Available | Negative | 511092 - 512183 | 41396.3 |
| yqjf family protein | A6122_RS02365 | Not Available | Negative | 512273 - 513001 | 26997.3 |
| dmt family transporter | A6122_RS02370 | Not Available | Positive | 513128 - 514075 | 32511.5 |
| toxic anion resistance protein | A6122_RS02375 | Not Available | Positive | 514222 - 515427 | 43608.6 |
| hypothetical protein | A6122_RS02380 | Not Available | Positive | 515431 - 515994 | 19849.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
