Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | A6122_RS02235 | Not Available | Negative | 485050 - 485643 | 21695.0 |
| nad(p)/fad-dependent oxidoreductase | A6122_RS02240 | Not Available | Positive | 485732 - 486688 | 32688.2 |
| response regulator | A6122_RS02245 | Not Available | Negative | 486696 - 487361 | 23437.2 |
| sensor histidine kinase | A6122_RS02250 | Not Available | Negative | 487358 - 488965 | 57002.2 |
| cation:dicarboxylate symporter family transporter | A6122_RS02255 | Not Available | Positive | 489170 - 490609 | 49988.4 |
| yitt family protein | A6122_RS02260 | Not Available | Negative | 490668 - 491297 | 21932.9 |
| plp-dependent aminotransferase family protein | A6122_RS02265 | Not Available | Positive | 491360 - 492796 | 51044.6 |
| rhs repeat-associated core domain-containing protein | A6122_RS02270 | Not Available | Positive | 492851 - 493528 | 22699.8 |
| hypothetical protein | A6122_RS02275 | Not Available | Positive | 493552 - 493998 | 16404.1 |
| hypothetical protein | A6122_RS16330 | Not Available | Positive | 494519 - 495091 | 19486.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
