Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mdr family mfs transporter | A6122_RS02180 | Not Available | Positive | 473052 - 474746 | 58444.7 |
| marr family winged helix-turn-helix transcriptional regulator | A6122_RS02185 | Not Available | Positive | 474746 - 475189 | 15935.2 |
| alpha/beta hydrolase | A6122_RS02190 | Not Available | Positive | 475324 - 477354 | 71728.7 |
| hypothetical protein | A6122_RS02195 | Not Available | Positive | 477440 - 477958 | 18243.0 |
| hypothetical protein | A6122_RS02200 | Not Available | Positive | 477955 - 478569 | 21668.4 |
| is3 family transposase | A6122_RS02210 | Not Available | Positive | 478933 - 480116 | 45153.4 |
| tetr family transcriptional regulator | A6122_RS02220 | Not Available | Negative | 480480 - 481052 | 20852.9 |
| mfs transporter | A6122_RS02225 | Not Available | Positive | 481183 - 482619 | 48863.0 |
| hypothetical protein | A6122_RS16315 | Not Available | Positive | 482843 - 483508 | 23148.1 |
| hypothetical protein | A6122_RS16320 | Not Available | Negative | 483560 - 484738 | 41400.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
