Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase | A6122_RS02135 | Not Available | Positive | 462697 - 463635 | 33910.7 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | A6122_RS02140 | Not Available | Positive | 463977 - 467720 | 134339.0 |
| marr family winged helix-turn-helix transcriptional regulator | A6122_RS02145 | Not Available | Positive | 467950 - 468474 | 19131.1 |
| ydei/ompd-associated family protein | A6122_RS02150 | Not Available | Positive | 468622 - 469053 | 14633.4 |
| glutamate-cysteine ligase family protein | A6122_RS17210 | Not Available | Positive | 469533 - 469676 | 4597.78 |
| had-ia family hydrolase | A6122_RS02160 | Not Available | Negative | 469690 - 470346 | 22518.7 |
| duf2510 domain-containing protein | A6122_RS16305 | Not Available | Positive | 470492 - 471424 | 32487.5 |
| hypothetical protein | A6122_RS02170 | Not Available | Negative | 471502 - 472071 | 18061.9 |
| hypothetical protein | A6122_RS16310 | Not Available | Negative | 472110 - 472316 | 7249.15 |
| lrp/asnc family transcriptional regulator | A6122_RS02175 | Not Available | Negative | 472396 - 472833 | 15675.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
