Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS02035 | Not Available | Positive | 445412 - 445780 | 11924.9 |
| phage holin family protein | A6122_RS02040 | Not Available | Positive | 445845 - 446258 | 14352.9 |
| duf3618 domain-containing protein | A6122_RS02045 | Not Available | Positive | 446248 - 446550 | 10824.2 |
| hydrogen peroxide-dependent heme synthase | A6122_RS02050 | Not Available | Positive | 446648 - 447427 | 29108.4 |
| ferrochelatase | A6122_RS02055 | Not Available | Positive | 447424 - 448638 | 43976.8 |
| hydroxymethylbilane synthase | A6122_RS02060 | Not Available | Positive | 448675 - 449676 | 33848.7 |
| uroporphyrinogen-iii synthase | A6122_RS02065 | Not Available | Positive | 449676 - 450470 | 27471.8 |
| duf559 domain-containing protein | A6122_RS02070 | Not Available | Negative | 450533 - 451405 | 31928.6 |
| porphobilinogen synthase | A6122_RS02075 | Not Available | Positive | 451552 - 452523 | 34468.1 |
| glutamate-1-semialdehyde 2,1-aminomutase | A6122_RS02080 | Not Available | Positive | 452610 - 453938 | 45626.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
