Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prenyltransferase | A6122_RS01935 | Not Available | Positive | 424620 - 425486 | 30823.9 |
| hypothetical protein | A6122_RS01940 | Not Available | Negative | 425566 - 425883 | 11455.0 |
| mfs transporter | A6122_RS01945 | Not Available | Negative | 425920 - 427275 | 47176.0 |
| lysr family transcriptional regulator | A6122_RS01950 | Not Available | Negative | 427334 - 428236 | 32341.3 |
| nadph-dependent f420 reductase | A6122_RS01955 | Not Available | Positive | 428377 - 428967 | 19892.8 |
| acyltransferase | A6122_RS01960 | Not Available | Positive | 428992 - 430131 | 40479.0 |
| zinc-binding dehydrogenase | A6122_RS01965 | Not Available | Positive | 430210 - 431331 | 40678.6 |
| thymidylate synthase | A6122_RS01970 | Not Available | Positive | 431393 - 432196 | 30557.1 |
| molecular chaperone dnak | A6122_RS01975 | Not Available | Positive | 432425 - 434287 | 66619.0 |
| nucleotide exchange factor grpe | A6122_RS01980 | Not Available | Positive | 434290 - 434919 | 22020.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
