Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hipa family toxin | A6122_RS01885 | Not Available | Negative | 416666 - 417955 | 46336.5 |
| helix-turn-helix transcriptional regulator | A6122_RS01890 | Not Available | Negative | 417945 - 418286 | 12166.6 |
| Trna-gly | Not Available | Not Available | Positive | 418826 - 418899 | Not Available |
| lrp/asnc ligand binding domain-containing protein | A6122_RS17535 | Not Available | Negative | 418329 - 418844 | 18784.2 |
| dctp deaminase | A6122_RS01905 | Not Available | Positive | 418987 - 419571 | 21543.4 |
| isopentenyl-diphosphate delta-isomerase | A6122_RS01910 | Not Available | Negative | 419658 - 420182 | 19265.9 |
| polyprenyl synthetase family protein | A6122_RS01915 | Not Available | Positive | 420416 - 421390 | 34501.9 |
| phytoene desaturase family protein | A6122_RS01920 | Not Available | Positive | 421461 - 423986 | 90556.9 |
| lycopene cyclase domain-containing protein | A6122_RS01925 | Not Available | Positive | 423989 - 424318 | 12125.3 |
| lycopene cyclase domain-containing protein | A6122_RS17205 | Not Available | Positive | 424315 - 424623 | 10953.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
