Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS16220 | Not Available | Positive | 30030 - 30563 | 19885.1 |
| xre family transcriptional regulator | A6122_RS00155 | Not Available | Positive | 30550 - 31893 | 48787.7 |
| nitroreductase/quinone reductase family protein | A6122_RS00160 | Not Available | Negative | 32024 - 32434 | 14956.5 |
| rok family transcriptional regulator | A6122_RS00165 | Not Available | Negative | 32469 - 33704 | 42342.0 |
| multiple monosaccharide abc transporter permease | A6122_RS00170 | Not Available | Negative | 33827 - 35056 | 42357.5 |
| multiple monosaccharide abc transporter atp-binding protein | A6122_RS00175 | Not Available | Negative | 35053 - 36573 | 54895.0 |
| multiple monosaccharide abc transporter substrate-binding protein | A6122_RS00180 | Not Available | Negative | 36684 - 37820 | 39776.4 |
| hypothetical protein | A6122_RS17480 | Not Available | Positive | 38227 - 38352 | 4239.28 |
| k(+)-transporting atpase subunit f | A6122_RS16225 | Not Available | Positive | 38349 - 38438 | 3097.04 |
| potassium-transporting atpase subunit kdpa | A6122_RS00190 | Not Available | Positive | 38438 - 40117 | 57540.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
